Fudan University has four campuses: Handan Campus, Jiangwan New Campus, LAM Raymond Campus and Zhangjiang Campus. Handan Campus owns most departments of Fudan University. LAM Raymond Campus is the seat of Shanghai Medical College of Fudan University. Besides the College of Pharmacy, there are other medical colleges in Shanghai. Zhangjiang Campus is home to Microelectronics Institute, Software College and Pharmacy College. Jiangwan Campus is the seat of Law School.

The majors offered by Fudan University are: philosophy, politics, China language and literature, China history, mathematics, physics, chemistry, biology, ecology, materials science and engineering, environmental science and engineering, basic medicine, clinical medicine, integrated traditional Chinese and western medicine, pharmacy, mechanical aerospace and manufacturing engineering, modern linguistics, Chinese language and literature, preventive medicine, biological science, basic medicine, economics, history and mathematics.